BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB005E05LP1|AL425382
(943 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig342 904 0.0
3x_Contig687 145 1e-34
>3x_Contig342
Length = 2225
Score = 904 bits (454), Expect = 0.0
Identities = 506/523 (96%), Gaps = 3/523 (0%)
Strand = Plus / Plus
Query: 3 acaatttctcactggactgttgttattgtttccagatgttttcgtacttatctgtcttag 62
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 1678 acaatttctcactggactgttgtaattgtttccagatgttttcgtacttatctgtcttag 1737
Query: 63 atcccagcgtacgttggaaatacccttgtwgtagtagcgttatttccgctagacaatcaa 122
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 1738 atcccagcgtacgttggaaatacccttgtagtagtagcgttatttccgctagacaatcaa 1797
Query: 123 gtgattcggccatgatattcaagtttttatctgtctttgtatgatagtctgtctgtcagt 182
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 1798 gtgattcggccatgatattcaagtttttatctgtctttgta-gatagtctgtctgtcagt 1856
Query: 183 gatgatgatatagattctattgcctttgtattgaagaatttcaagacatcggacaattga 242
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1857 gatgatgatatagattctattgcctttgtattgaagaatttcaagacatcggacaattga 1916
Query: 243 cgttcgcmatgtcttgcatactgtgatgggaagtttgaggcgagttccaataaagttttg 302
||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 1917 cgttcgcaatgtcttgcatactgtgatgggaagtttgaggcgagtaacaataaagttttg 1976
Query: 303 atcattttgatggcaaggattagagcctcgcttgccacgaatgtcttatcacctaagaca 362
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1977 atcattttgatggcaaggattagagcctcgcttgccacgaatgtcttatcacctaagaca 2036
Query: 363 acggattttttgtgaccggtagaggattgcttctcatcctttgtttcgtctaatggagaa 422
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2037 acggattttttgtgaccggtagaggattgcttctcatcctttgtttcgtctaatggagaa 2096
Query: 423 ggtttgttcaactcgatgaatcgtgtccaatttgacggatcaatgtcaatacacgataca 482
|||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||
Sbjct: 2097 ggtttgttcaactcgatgaatcgtgtccaatttgacggttcaatgtcaatacacgctaca 2156
Query: 483 atatcattgacatccttttgcmattcgggctcgacgatgaatg 525
| | | || | ||||||| |||||||||||||||||||||
Sbjct: 2157 tttccttggaaa--cttttgcaattcgggctcgacgatgaatg 2197
>3x_Contig687
Length = 2400
Score = 145 bits (73), Expect = 1e-34
Identities = 73/73 (100%)
Strand = Plus / Plus
Query: 870 atgtctaatagcattttctgatgccgcgttaacctcttcaatagttcgatttcagaagtg 929
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 atgtctaatagcattttctgatgccgcgttaacctcttcaatagttcgatttcagaagtg 60
Query: 930 aatatatttacaa 942
|||||||||||||
Sbjct: 61 aatatatttacaa 73
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.712 1.31
Gapped
Lambda K H
1.38 0.712 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6757
Number of Sequences: 1807
Number of extensions: 6757
Number of successful extensions: 44
Number of sequences better than 1.0e-20: 2
length of query: 943
length of database: 10,358,551
effective HSP length: 16
effective length of query: 927
effective length of database: 10,329,639
effective search space: 9575575353
effective search space used: 9575575353
T: 0
A: 40
X1: 6 (12.0 bits)
X2: 15 (29.9 bits)
S1: 12 (24.4 bits)
S2: 50 (100.1 bits)